Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890547.1_cds_XP_016445282.1_40256
CDS Infomation

[gene=LOC107770481] [db_xref=GeneID:107770481] [protein=dnaJ protein P58IPK homolog] [protein_id=XP_016445282.1] [location=join(26749..26884,27786..27951,28907..29108,29243..29403,29580..29673,29789..30001,30577..30657,31118..31336,31598..31771)] [gbkey=CDS]
Sequence

ATGGAGCCATTGATTAAGAAGCTATGGAGCTTTGATTATTTCGTGGCGTGGAGGGGCTTC
TTATTTTCAGCATTGATACTCAACTTTGTATTTGCCTGCCAATTTCTTTTTCTTCAACCC
CTTGTATCTGCCTTAGACACCAAACCTGGAGATGCTGCTGCACTGTTTGAGAGAGTTTCA
CAAAATGTAAAAGTTAAGAAATACAGTGAGGCACTTAATGATCTAAATTCAGCCATAGAG
GCAGACCCAGCGCTTTCAGAGGCGTATTGGCGTCGTGCATCTCTTCTTTGTCAGTTGTGC
AGATATGATGAATCAGAAAGAAGCTACAAAAAGTTTCTGGAGATGAAACCAGGAGACTCA
GCTGCGGAAAAGGAGCTTTCTCAGTTGCACCAATCTAAGAGTGCTTTTGATTCAGCTACC
AACCTGTTGGACACAGGTGACATTAAAAAAGCATTGGAGTATATTGATAAAGTCGTACTT
GTTTTCTCTCCAGCATGCTCCAAGGCCAAACTCCTTAAGGCGAAACTATTGCTCTCAGAT
AAAGATTATTCCAGTGTCATATCTGAAACGGGATACATACTTAAAGAAGATGAGGATAAT
CTGGAGGCTTTACTGCTACGAGGCCGTGCCTACTACTATCTGGCTGATCATGATGTCGCC
TTAAGGCACTACCAAAAAGGTCTTCGTTCAGACCCAGAGCATGGGGAATTGAAGAAAGCA
TATTTTGGCTTGAAAAACTTACTGAAAAAGACTAAAAGTGCCGAAGATAATGCAAGTAAG
GGTAAGCTTCGCCTTGCTGTGGAGGAGTATAAAGCAGCACTGACAATGGACCCCAACCAT
TCTGCACATAATGTAAATCTTCATCTTGGTTTGTGTAAAGTCTTGGTGAAGCTTGGAAGA
GGGAAGGATGCCATATCGAGTTGCTCAGAAGCTCTTGAGCTTGATGGAGAGCTTATTGAT
GCTCTAGTGCAGAGGGGTGAAGCCAAGCTTCTAACAGAAGATTGGGAGGGAGCTGTTGCA
GATTTGAAAGAAGCAGCCGAAAAATCTCCTCAGGATAGGAATATTCGTGAAGCGCTGATG
AGGGCTGAGAGATCTTTGAAATTGAGCCAACGGAAGGATTGGTACAAGATCTTGGGAGTC
TCAAAGACAGCATCTGTTTCAGAGATCAAAAAGGCATACAAAAAGCTTGCTCTGCAATGG
CATCCAGACAAGAACGTTGAAAACAGAGAAGAAGCAGAAAACAAATTTCGTGAAATAGCA
GCTGCATATGAGGTTCTAGGTGACGAGGAAAAACGTACACGATATGACCAAGGGGAAGAC
ATTGACGACATGGGTTCAGGAATGGGTGGTGGGGGATTCAACCCTTTCGGCGGAGGAGGG
CAGCAGTATACATTCCACTTTGAAGGAGGATTTCCAGGTGGGGGATTTGGCGGATTCCAT
TTTTGA

Peptide Sequence

PEP ID

XP_016445282.1
PEP Infomation

PREDICTED: dnaJ protein P58IPK homolog [Nicotiana tabacum]
Sequence

MEPLIKKLWSFDYFVAWRGFLFSALILNFVFACQFLFLQPLVSALDTKPGDAAALFERVS
QNVKVKKYSEALNDLNSAIEADPALSEAYWRRASLLCQLCRYDESERSYKKFLEMKPGDS
AAEKELSQLHQSKSAFDSATNLLDTGDIKKALEYIDKVVLVFSPACSKAKLLKAKLLLSD
KDYSSVISETGYILKEDEDNLEALLLRGRAYYYLADHDVALRHYQKGLRSDPEHGELKKA
YFGLKNLLKKTKSAEDNASKGKLRLAVEEYKAALTMDPNHSAHNVNLHLGLCKVLVKLGR
GKDAISSCSEALELDGELIDALVQRGEAKLLTEDWEGAVADLKEAAEKSPQDRNIREALM
RAERSLKLSQRKDWYKILGVSKTASVSEIKKAYKKLALQWHPDKNVENREEAENKFREIA
AAYEVLGDEEKRTRYDQGEDIDDMGSGMGGGGFNPFGGGGQQYTFHFEGGFPGGGFGGFH
F

Transcript Sequence

Gene sequence data has not been registered.